Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015890901.1_cds_XP_016445590.1_40536
CDS Infomation

[gene=LOC107770772] [db_xref=GeneID:107770772] [protein=tRNA pseudouridine synthase A-like] [protein_id=XP_016445590.1] [location=join(33403..33684,33779..33835,34651..34728,34987..35040,37676..37758,38157..38256,38334..38396,40450..40728,41387..41447,41534..41640)] [gbkey=CDS]
Sequence

ATGACAGACGATCAATCACAACCGTTGATCTCGGAGATTAGTAAGCACTCGCTCGATCCA
CGGGCTGAATCTCCCCAACGGCGTTCCAAAATCGCCAAGGTAAACGACGACAACATCGCC
GTCGAAGTCGTTGAAGAGGAAGAGCAGAAAGAGTCAGTTACTAGACCAATGAATCCTAAT
CCTCGGCTACAGCGGTACTTGATAGCAATCGAGTATATAGGAACTCGCTTCGCCGGCGCA
CAGCAACAAACTAATTGTAGAACTGTAGTCGGTGTACTTGAGGAAGCATTTCAGAAGTTT
GTTGGACAGCCAGTGTCTATATTTTGCTCCAGTCGAACTGATGCTGGAGTACACGCTTTA
TCAAATGTTTGCCATGTAGATGTTGAAAGGATAAGCAAAAGGAAACCTGGTGAAGTGTTA
CCTCCTCATGAACCTTTGGTGGTACAAAGAGCTGTGAACCATTTTTTACAGAAGAACGGG
GGTGATATAATGGTTATTGACATTCGGCGTGTTCCAGCTGATTTTCATGCCAGATATAAA
GCTCAAGAACGCACGTACTTCTACCGCTTGTTATCTGGGCCGAAGTGGGCATCAAGCTTC
GAGAAAGACCGAGCTTGGCATGTGCCTGAGAGTCTGGATCTTCCTGCCATGCAGAAGGCA
TGCAACGTTCTTGTTGGACGTCATGATTTCAGTTCTTTCAGAGCAGCTGCTTGTCAGGCA
AACTCACCCATCAGAACTTTGGAAGAACTTAACGTTACTGAGGTTGTTTCAACTCCATAT
TTTCCATCAATCTCAGAGAGACTACGGAGCAATAGTGTGATGGAAGATCCAACTGTATCC
TTGGGTTCAGACACCGACCATTCCCATACTTCTTTGACCTCCAATGAGGGGAAGTCAGAC
GGCACAAATGGCGAGGCTTGCCAAGACTTTGGCCTAAGAAGAAAACACCGTTGCTTTGTG
GTGACAGCAAGAGCACGATCTTTCCTTTACCATCAGGTTAGGCTGCTTGTTGGAGTCCTT
AAAGCAGTTGGGGCTGGAGATCTAACAGTTCCTGATGTAAAACGCATCCTTGAAGCAAAA
TCCATCACTGCTGCAAGTCCGATGGCTCCTGCTTGTGGTCTTTATCTTGGACACGTCAAA
TATGATCTGCCTCCTGACTCCTGA

Peptide Sequence

PEP ID

XP_016445590.1
PEP Infomation

PREDICTED: tRNA pseudouridine synthase A-like [Nicotiana tabacum]
Sequence

MTDDQSQPLISEISKHSLDPRAESPQRRSKIAKVNDDNIAVEVVEEEEQKESVTRPMNPN
PRLQRYLIAIEYIGTRFAGAQQQTNCRTVVGVLEEAFQKFVGQPVSIFCSSRTDAGVHAL
SNVCHVDVERISKRKPGEVLPPHEPLVVQRAVNHFLQKNGGDIMVIDIRRVPADFHARYK
AQERTYFYRLLSGPKWASSFEKDRAWHVPESLDLPAMQKACNVLVGRHDFSSFRAAACQA
NSPIRTLEELNVTEVVSTPYFPSISERLRSNSVMEDPTVSLGSDTDHSHTSLTSNEGKSD
GTNGEACQDFGLRRKHRCFVVTARARSFLYHQVRLLVGVLKAVGAGDLTVPDVKRILEAK
SITAASPMAPACGLYLGHVKYDLPPDS

Transcript Sequence

Gene sequence data has not been registered.